BindingDB Reactant_set_id Ligand SMILES Ligand InChI Ligand InChI Key BindingDB MonomerID BindingDB Ligand Name Target Name Target Source Organism According to Curator or DataSource Ki (nM) IC50 (nM) Kd (nM) EC50 (nM) kon (M-1-s-1) koff (s-1) pH Temp (C) Curation/DataSource Article DOI BindingDB Entry DOI PMID PubChem AID Patent Number Authors Institution Link to Ligand in BindingDB Link to Target in BindingDB Link to Ligand-Target Pair in BindingDB Ligand HET ID in PDB PDB ID(s) for Ligand-Target Complex PubChem CID of Ligand PubChem SID of Ligand ChEBI ID of Ligand ChEMBL ID of Ligand DrugBank ID of Ligand IUPHAR_GRAC ID of Ligand KEGG ID of Ligand ZINC ID of Ligand Number of Protein Chains in Target (>1 implies a multichain complex) BindingDB Target Chain Sequence PDB ID(s) of Target Chain UniProt (SwissProt) Recommended Name of Target Chain UniProt (SwissProt) Entry Name of Target Chain UniProt (SwissProt) Primary ID of Target Chain UniProt (SwissProt) Secondary ID(s) of Target Chain UniProt (SwissProt) Alternative ID(s) of Target Chain UniProt (TrEMBL) Submitted Name of Target Chain UniProt (TrEMBL) Entry Name of Target Chain UniProt (TrEMBL) Primary ID of Target Chain UniProt (TrEMBL) Secondary ID(s) of Target Chain UniProt (TrEMBL) Alternative ID(s) of Target Chain 1312529 Nc1cccc2C(=O)N(C3CCC(=O)NC3=O)C(=O)c12 InChI=1S/C13H11N3O4/c14-7-3-1-2-6-10(7)13(20)16(12(6)19)8-4-5-9(17)15-11(8)18/h1-3,8H,4-5,14H2,(H,15,17,18) UVSMNLNDYGZFPF-UHFFFAOYSA-N 65456 19171-19-8::4-amino-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione::Actimid::CC-4047::Pomalyst::US11059801, Compound D-4::US20230271966, Compound Pomalidomide::US9694015, 6.2::pomalidomide EKC/KEOPS complex subunit TP53RK 5200 US Patent 10.7270/Q2XD15TB US20230271966 Anderson, KC; Hideshima, T; Dhe-Paganon, S; Seo, H; Mizutani, T; Zhang, T Dana-Farber Cancer Institute, Inc. http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=65456 http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=1467&target=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=65456&enzyme=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search Y70 134780 350083086 DB08910 ZINC15953204 1 MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLDEVRLRGRKRSMVG 1312531 C[C@]1(CCC(=O)NC1=O)N1C(=O)c2ccc(cc2C1=O)C(O)=O InChI=1S/C15H12N2O6/c1-15(5-4-10(18)16-14(15)23)17-11(19)8-3-2-7(13(21)22)6-9(8)12(17)20/h2-3,6H,4-5H2,1H3,(H,21,22)(H,16,18,23)/t15-/m1/s1 VWVJRXADTDRXRW-OAHLLOKOSA-N 616156 (R)-2-(3-methyl-2,6-dioxopiperidin-3-yl)- 1,3-dioxoisoindoline-5-carboxylic acid::US20230271966, Compound 12 EKC/KEOPS complex subunit TP53RK 280 US Patent 10.7270/Q2XD15TB US20230271966 Anderson, KC; Hideshima, T; Dhe-Paganon, S; Seo, H; Mizutani, T; Zhang, T Dana-Farber Cancer Institute, Inc. http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=616156 http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=1467&target=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=616156&enzyme=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search DVO 1 MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLDEVRLRGRKRSMVG 1312533 Oc1c2C(=O)N(C3CCC(=O)NC3=O)C(=O)c2ccc1-c1cn[nH]c1 616157 2-(2,6-dioxopiperidin-3-yl)-4-hydroxy-5- (1H-pyrazol-4-yl)isoindoline-1,3-dione::US20230271966, Compound 13 EKC/KEOPS complex subunit TP53RK 1900 US Patent 10.7270/Q2XD15TB US20230271966 Anderson, KC; Hideshima, T; Dhe-Paganon, S; Seo, H; Mizutani, T; Zhang, T Dana-Farber Cancer Institute, Inc. http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=616157 http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=1467&target=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=616157&enzyme=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search 1 MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLDEVRLRGRKRSMVG 1312535 C[C@]1(CCC(=O)NC1=O)N1C(=O)c2ccc(-c3cn[nH]c3)c(O)c2C1=O 616158 (R)-4-hydroxy-2-(3-methyl-2,6-dioxopiperidin-3- yl)-5-(1H-pyrazol-4-yl)isoindoline-1,3-dione::US20230271966, Compound 22 EKC/KEOPS complex subunit TP53RK >1000000 US Patent 10.7270/Q2XD15TB US20230271966 Anderson, KC; Hideshima, T; Dhe-Paganon, S; Seo, H; Mizutani, T; Zhang, T Dana-Farber Cancer Institute, Inc. http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=616158 http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=1467&target=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=616158&enzyme=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search 1 MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLDEVRLRGRKRSMVG 1312537 C[C@]1(CCC(=O)NC1=O)N1C(=O)c2ccc(cc2C1=O)-c1n[nH]c(=S)o1 616159 (R)-2-(3-methyl-2,6-dioxopiperidin-3-yl)-5- (5-thioxo-4,5-dihydro-1,3,4-oxadiazol-2-yl) isoindoline-1,3-dione::US20230271966, Compound 30 EKC/KEOPS complex subunit TP53RK 360 US Patent 10.7270/Q2XD15TB US20230271966 Anderson, KC; Hideshima, T; Dhe-Paganon, S; Seo, H; Mizutani, T; Zhang, T Dana-Farber Cancer Institute, Inc. http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=616159 http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=1467&target=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=616159&enzyme=EKC%2FKEOPS+complex+subunit+TP53RK&column=ki&startPg=0&Increment=50&submit=Search 1 MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLDEVRLRGRKRSMVG